I sent you a PM..here it is in case you didnt get it.

Problem
The wire bundle from the VSS is shorting out behind the intake manifold. Common problem on 98.
troubleshooting tips
http://www.clubcivic.com/board/showthread.php?t=180280
scroll down^

The wiretuck will make it hard to troubleshoot but do the tests and you will find the problem.