Thanks, i got it timed. The FPR doesn't change the way the car idles or runs with vaccume line on or off. I think that may be some of the problem.

*figured out why the fuel injectors could be swapped*
The 4th fuel injector wiring was backwards. I am assuming that would leave the injector open for too long, pulsing at the wrong time. That would account for the
changing between the 3rd and 4th cylinder